pygeoda
USER GUIDE
1. Introduction
1.1 Open Resources
2. Installation
2.1 Windows
2.2 Linux
2.3 Mac
2.4 Import pygeoda
3. Load Spatial Data
3.1 Attributes of geoda object
3.2 Access Table Data
4. Map Classification
4.1 Hinge Box Breaks
4.2 Natural Breaks
4.3 Quantile Breaks
4.4 Percentile Breaks
4.5 Standard Deviation Breaks
5. Spatial Weights
5.1 Queen Contiguity Weights
5.2 Attributes of
Weight
object
5.3 Rook Contiguity Weights
5.4 Distance Based Weights
5.5 K-Nearest Neighbor Weights
5.6 Kernel Weights
5.6.1 Kernel Weights with fixed bandwidth
5.6.2 Kernel Weights with adaptive bandwidth
6. Local Indicators of Spatial Association
6.1 Local Moran
6.2 LISA object
6.3 Local Geary
6.4 Local Getis-Ord Statistics
6.5 Local Join Count
6.6 Local Bivariate Join Count
6.7 Local Multivariate Join Count
6.8 Quantile LISA
6.9 Multivariate Quantile LISA
6.10 Neighbor Match Test
6.11 Bivariate Local Moran
7. Spatial Clustering
7.1 SKATER
7.2 REDCAP
7.3 Spatially Constrained Hierarchical Clucstering
7.3 AZP
7.3.1 AZP greedy
7.3.2 AZP Simulated Annealing
7.3.3 AZP Tabu Search
7.4 Max-p
7.4.1 Max-p greedy
7.4.2 Max-p Tabu Search
7.4.3 Max-p Simulated Annealing
7.5 Validation
ESDA with pygeoda and geopandas
1 GeoPandas
2 Matplotlib
3 GeoPandas + pygeoda
3.1 Load geospatial data in GeoPandas
3.2 Create pygeoda object from geodataframe
3.3 ESDA with pygeoda and geopandas
API REFERENCE
pygeoda API
pygeoda (I/O)
pygeoda.open
pygeoda.geoda
pygeoda.weights
pygeoda.Weight
pygeoda.queen_weights
pygeoda.rook_weights
pygeoda.min_distthreshold
pygeoda.distance_weights
pygeoda.knn_weights
pygeoda.kernel_weights
pygeoda.kernel_knn_weights
pygeoda (LISA)
pygeoda.lisa
pygeoda.local_moran
pygeoda.local_bimoran
pygeoda.local_geary
pygeoda.local_multigeary
pygeoda.local_joincount
pygeoda.local_bijoincount
pygeoda.local_multijoincount
pygeoda.local_g
pygeoda.local_gstar
pygeoda.local_quantilelisa
pygeoda.local_multiquantilelisa
pygeoda.neighbor_match_test
pygeoda.batchlisa
pygeoda.batch_local_moran
pygeoda (spatial clustering)
pygeoda.skater
pygeoda.redcap
pygeoda.schc
pygeoda.azp_greedy
pygeoda.azp_sa
pygeoda.azp_tabu
pygeoda.maxp_greedy
pygeoda.maxp_sa
pygeoda.maxp_tabu
pygeoda.spatial_validation
pygeoda.Fragmentation
pygeoda.Diameter
pygeoda.Compactness
pygeoda.JoinCountRatio
pygeoda.ValidationResult
pygeoda.make_spatial
pygeoda (classify)
pygeoda.hinge15_breaks
pygeoda.hinge30_breaks
pygeoda.natural_breaks
pygeoda.quantile_breaks
pygeoda.percentile_breaks
pygeoda.stddev_breaks
pygeoda (data)
pygeoda.demean
pygeoda.standardize
pygeoda.mad
pygeoda
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Index
Index
_
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A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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V
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W
_
__init__() (pygeoda.batchlisa method)
(pygeoda.Compactness method)
(pygeoda.Diameter method)
(pygeoda.Fragmentation method)
(pygeoda.geoda method)
(pygeoda.JoinCountRatio method)
(pygeoda.lisa method)
(pygeoda.ValidationResult method)
(pygeoda.Weight method)
A
area (pygeoda.Compactness attribute)
azp_greedy() (in module pygeoda)
azp_sa() (in module pygeoda)
azp_tabu() (in module pygeoda)
B
batch_local_moran() (in module pygeoda)
batchlisa (class in pygeoda)
C
cluster_fragmentation (pygeoda.ValidationResult attribute)
Compactness (class in pygeoda)
compactness (pygeoda.ValidationResult attribute)
D
demean() (in module pygeoda)
Diameter (class in pygeoda)
diameter (pygeoda.ValidationResult attribute)
distance_weights() (in module pygeoda)
E
entropy (pygeoda.Fragmentation attribute)
F
field_names (pygeoda.geoda attribute)
field_types (pygeoda.geoda attribute)
fragmantation (pygeoda.ValidationResult attribute)
Fragmentation (class in pygeoda)
G
geoda (class in pygeoda)
H
hinge15_breaks() (in module pygeoda)
hinge30_breaks() (in module pygeoda)
I
isoperimeter_quotient (pygeoda.Compactness attribute)
J
join_count (pygeoda.JoinCountRatio attribute)
joincount_ratio (pygeoda.ValidationResult attribute)
JoinCountRatio (class in pygeoda)
K
kernel_knn_weights() (in module pygeoda)
kernel_weights() (in module pygeoda)
knn_weights() (in module pygeoda)
L
lisa (class in pygeoda)
local_bijoincount() (in module pygeoda)
local_bimoran() (in module pygeoda)
local_g() (in module pygeoda)
local_geary() (in module pygeoda)
local_gstar() (in module pygeoda)
local_joincount() (in module pygeoda)
local_moran() (in module pygeoda)
local_multigeary() (in module pygeoda)
local_multijoincount() (in module pygeoda)
local_multiquantilelisa() (in module pygeoda)
local_quantilelisa() (in module pygeoda)
M
mad() (in module pygeoda)
make_spatial() (in module pygeoda)
map_type (pygeoda.geoda attribute)
maxp_greedy() (in module pygeoda)
maxp_sa() (in module pygeoda)
maxp_tabu() (in module pygeoda)
min_distthreshold() (in module pygeoda)
N
n (pygeoda.Fragmentation attribute)
(pygeoda.JoinCountRatio attribute)
(pygeoda.ValidationResult attribute)
natural_breaks() (in module pygeoda)
neighbor_match_test() (in module pygeoda)
neighbors (pygeoda.JoinCountRatio attribute)
num_cols (pygeoda.geoda attribute)
num_obs (pygeoda.geoda attribute)
O
open() (in module pygeoda)
P
percentile_breaks() (in module pygeoda)
perimeter (pygeoda.Compactness attribute)
Q
quantile_breaks() (in module pygeoda)
queen_weights() (in module pygeoda)
R
ratio (pygeoda.Diameter attribute)
(pygeoda.JoinCountRatio attribute)
redcap() (in module pygeoda)
rook_weights() (in module pygeoda)
S
schc() (in module pygeoda)
simpson (pygeoda.Fragmentation attribute)
skater() (in module pygeoda)
spatial_validation() (in module pygeoda)
spatially_constrained (pygeoda.ValidationResult attribute)
standardize() (in module pygeoda)
std_entropy (pygeoda.Fragmentation attribute)
std_simpson (pygeoda.Fragmentation attribute)
stddev_breaks() (in module pygeoda)
steps (pygeoda.Diameter attribute)
V
ValidationResult (class in pygeoda)
W
Weight (class in pygeoda)